Transcript eQTL query


Step1: select a dataset

CMC             PsychENCODE            

Step2: input your transcript id

or - Input SNPs

Step2: input SNPs

ENSG00000078808
ENSG00000237491
ENST00000567253

or - Input SNPs

rs373477
rs13079006

Where does this data come from?

We collected gene expression quantitative trait loci (eQTL) data from the following studies:

  1. CMC eQTL (http://www.synapse.org/CMC): Fromer et al. 2016. Gene expression elucidates functional impact of polygenic risk for schizophrenia. Nature Neuroscience, 19(11):1442-1453. [PMID: 27668389].
  2. PsychENCODE eQTL (http://resource.psychencode.org/) :Gandal et al. 2018. Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder. Science, 362(6420):eaat8127. [PMID: 30545856].
If you used this data, please cite the reletive reference.